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#[] PMC::EfetchXMLSummaries
#[] BibliographicalImporter::CSV::Reader
#[] BibliographicalImporter::Ris::Reader
#[] BibliographicalImporter::JSON::Reader
#[] BibliographicalImporter::BibTex::Reader
#[] BibliographicalImporter::PmcEfetchXml::Reader
#[] BibliographicalImporter::PubmedSummary::Reader
#[] BibliographicalImporter::JSONApiCrossref::Reader
#a_doi DOIHelpers
#a_editable HTMLHelpers
#a_generic_editable HTMLHelpers
#a_tag HTMLHelpers
#a_tag_badge HTMLHelpers
#a_textarea_editable HTMLHelpers
#absolute_path IFile
#abstract PdfProcessor
#abstract BibliographicalImporter::CommonRecordAttributes
#accesible_users User
#active Sinatra::XeditableAbstract
#adapt_ads_cds Sinatra::Pagers::Pager
#adapt_cds Sinatra::Pagers::Pager
#add_auth_to Role
#add_canonical_documents Buhos::ExcelBuilder
add_criterion_to_rs Buhos::QualityCriteriaProcessor
#add_custom_form ReportBuilder::FullTextReport::Excel
add_doi ReferenceProcessor
#add_doi Record
#add_doi Reference
#add_doi_automatic Record
add_from_bi_response Pmc_Summary
add_from_json Semantic_Scholar_Paper
add_from_xml Scopus_Abstract
#add_inline_code ReportBuilder::FullTextReport::Excel
#add_javascript FormBuilder
#add_javascript_to_fb FormBuilder::Field
#add_message Sinatra::Messages::Helpers
add_nonuser_event SecurityEvent
#add_result Result
#add_result Sinatra::Messages::Helpers
#add_stage ReportBuilder::ProcessReport::Excel
#add_stage_search ReportBuilder::ProcessReport::Excel
#add_to_cd FileProcessor
#add_to_record_search FileProcessor
#add_to_sr FileProcessor
add_user_event SecurityEvent
#adjust_page_order Sinatra::Pagers::Pager
#administrator_name Group
#administrator_name SystematicReview
#adu_for_sr UserDashboardInfo
#affiliation BibliographicalImporter::CommonRecordAttributes
#aiec ReportBuilder::ProcessReport
#all_allocations Buhos::AnalysisCdDecisions
#all_decisions Buhos::AnalysisCdDecisions
allocate_authorizations_to_roles Buhos::SchemaCreation
#allocate_tag T_Class
allocate_users_to_groups Buhos::SchemaCreation
#allocated_to_cd_id AnalysisUserDecision
#allow_password_recovery? Sinatra::SessionAuth::Helpers
#analysis_cd SystematicReview
#analysis_cd_tn SystematicReview
#analysis_cd_user_row SystematicReview
#analysis_rs ReportBuilder::FulltextReport
api_key PMC
#app ReportBuilder::ReportAbstract
approve_tag TagBwCd
approve_tag TagInCd
approve_tag_batch TagInCd
#aqc ReportBuilder::FulltextReport
#ars ReportBuilder::ProcessReport
#ars ReportBuilder::FulltextReport
assign_to_canonical_document ReferenceProcessor
#assignations AnalysisUserDecision
#auth_to Sinatra::SessionAuth::Helpers
#author PdfProcessor
#author PdfFileProcessor
#author BibliographicalImporter::CommonRecordAttributes
#author BibliographicalImporter::CSV::Record_Generic
#author BibliographicalImporter::CSV::Record_Refworks
#author BibliographicalImporter::JSON::Record
#author BibliographicalImporter::PmcEfetchXml::Record
#author BibliographicalImporter::PubmedSummary::Record
#author BibliographicalImporter::JSONApiCrossref::Record
#author_ref_apa_6 ReferenceMethods
#authorizations User
#authorize Sinatra::SessionAuth::Helpers
#authors BibliographicalImporter::CommonRecordAttributes
#authors BibliographicalImporter::BibTex::Record
#authors_apa_6 ReferenceMethods
#authors_parse= BibliographicalImporter::CSV::Record_Generic
#available_locales Sinatra::I18n::Helpers
#available_locales_hash Sinatra::I18n::Helpers
#base BibliographicalImporter::CSV::Reader
#base BibliographicalImporter::PubmedSummary::Reader
#basedir FileProcessor
#bb BibliographicalImporter::BibTex::Reader
#bb_general_id PdfFileProcessor
#begin_tag AbstractPresentation
#bib_references SystematicReviewViewsMixin
#bib_references_tn SystematicReviewViewsMixin
#bibliographical_database_name Search
#bool_class HTMLHelpers
#button_change_html TagBuilder::TagBwCd
#button_change_html TagBuilder::TagInCd
#button_negative_html TagMixin
#button_positive_html TagMixin
#button_same_html TagMixin
#buttons FileHandler::ModalFiles
#buttons_html TagMixin
#bv BibliographicalImporter::BibTex::Record
#by_doi Buhos::DuplicateAnalysis
#by_metadata Buhos::DuplicateAnalysis
#by_pubmed_id Buhos::DuplicateAnalysis
#by_scielo_id Buhos::DuplicateAnalysis
#by_scopus_id Buhos::DuplicateAnalysis
#by_wos_id Buhos::DuplicateAnalysis
calculate_id Reference
#can_docs_query SearchValidator
#can_docs_query SearchValidatorUser
#can_docs_query SearchValidatorReview
#canonical_document PdfFileProcessor
#canonical_document_id Buhos::AnalysisTags
#canonical_document_processed BibliographicFileProcessor
#canonical_documents AnalysisUserDecision
#canonical_documents Buhos::DuplicateAnalysis
#canonical_documents SystematicReview
#canonical_documents_by_tag Buhos::AnalysisTags
#canonical_documents_id Buhos::AnalysisSearches
#cargador_archivo FileHandler::ModalFiles
#categorias_cd_id CategorizerSr
#cd_accepted_id Analysis_SR_Stage
#cd_accepted_id AnalysisSrStageMixin
#cd_all_id AnalysisSystematicReview
#cd_all_id SystematicReview
#cd_all_id_old SystematicReview
#cd_all_id_table SystematicReviewViewsMixin
#cd_all_id_table_tn SystematicReviewViewsMixin
#cd_categoria CategorizerSr
#cd_count_incoming AnalysisSystematicReview
#cd_count_incoming_sta AnalysisSystematicReview
#cd_count_outgoing AnalysisSystematicReview
#cd_count_ref AnalysisSystematicReview
#cd_count_reg AnalysisSystematicReview
#cd_count_total AnalysisSystematicReview
#cd_dois_arent_different Buhos::DuplicateAnalysis
#cd_from_pattern AnalysisSrStageMixin
#cd_h ReportBuilder::ProcessReport
#cd_h ReportBuilder::FulltextReport
#cd_hash AnalysisSystematicReview
#cd_hash SystematicReview
#cd_id_assigned_by_user Analysis_SR_Stage
#cd_id_assigned_by_user AnalysisSrStageMixin
#cd_id_by_stage SystematicReview
#cd_id_resolutions SystematicReview
#cd_id_table SystematicReviewViewsMixin
#cd_id_table_tn SystematicReviewViewsMixin
#cd_ids Buhos::AnalysisIncExcCriteria
#cd_ids Buhos::AnalysisQualityCriteria
#cd_in_record? AnalysisSystematicReview
#cd_in_reference? AnalysisSystematicReview
#cd_in_resolution_stage? AnalysisSystematicReview
#cd_included_by_stage AnalysisSystematicReview
#cd_included_in_stage? AnalysisSystematicReview
#cd_is_identical Buhos::DuplicateAnalysis
#cd_is_very_similar Buhos::DuplicateAnalysis
#cd_record_id SystematicReview
#cd_record_id_old SystematicReview
#cd_record_id_table SystematicReviewViewsMixin
#cd_record_id_table_tn SystematicReviewViewsMixin
#cd_ref_id AnalysisSystematicReview
#cd_reference_id SystematicReview
#cd_reference_id_old SystematicReview
#cd_reference_id_table SystematicReviewViewsMixin
#cd_reference_id_table_tn SystematicReviewViewsMixin
#cd_reg_id AnalysisSystematicReview
#cd_rejected_id Analysis_SR_Stage
#cd_rejected_id AnalysisSrStageMixin
#cd_resolved_id Analysis_SR_Stage
#cd_resolved_id AnalysisSrStageMixin
#cd_screened_id Analysis_SR_Stage
#cd_screened_id AnalysisSrStageMixin
#cd_with_no_decisions AnalysisSrStageMixin
#cd_without_abstract Analysis_SR_Stage
#cd_without_abstract AnalysisSrStageMixin
#cd_without_allocations Analysis_SR_Stage
#cd_without_allocations AnalysisSrStageMixin
#cds_out Sinatra::Pagers::PagerCdQueryAdapter
#cds_out Sinatra::Pagers::PagerAdsQueryAdapter
cds_rs_tag TagInCd
change_criterion_name Buhos::QualityCriteriaProcessor
#change_password User
change_sr_criterion_name Buhos::QualityCriteriaProcessor
#check_doi ReferenceProcessor
#check_journal BibliographicalImporter::BibTex::Record
#check_title BibliographicalImporter::BibTex::Record
#check_year BibliographicalImporter::BibTex::Record
#checkbox_html FormBuilder::Field
#cite_apa_6 ReferenceMethods
#cited BibliographicalImporter::CommonRecordAttributes
#cited_by AnalysisSystematicReview::ReferencesBetweenCanonicals
#cited_by_rtr AnalysisSystematicReview::ReferencesBetweenCanonicals
#cited_references BibliographicalImporter::CSV::Record_Generic
#cited_references BibliographicalImporter::CSV::Record_Refworks
#cited_references BibliographicalImporter::Ris::Record
#cited_references BibliographicalImporter::BibTex::Record_Scopus
#cited_references BibliographicalImporter::BibTex::Record_Wos
#cited_references BibliographicalImporter::BibTex::Record_Scielo
#cited_references BibliographicalImporter::BibTex::Record_Ebscohost
#cited_references BibliographicalImporter::BibTex::Record_Generic
#cited_references BibliographicalImporter::PubmedSummary::Record
#cites AnalysisSystematicReview::ReferencesBetweenCanonicals
#class_bootstrap_contextual HTMLHelpers
#class_keyword AbstractPresentation
classes_documents T_Class
#clean_tree Buhos::SearchParser
#config_get Buhos::Helpers
#config_set Buhos::Helpers
connect_to_db Buhos
#correct_password? User
#count Result
#count_by_pattern AnalysisSrStageMixin
#count_references_bw_canonical SystematicReviewViewsMixin
#count_references_bw_canonical_tn SystematicReviewViewsMixin
#count_references_rtr SystematicReviewViewsMixin
#count_references_rtr_tn SystematicReviewViewsMixin
#cpp Sinatra::Pagers::Pager
create BibliographicalImporter::AbstractRecord
create BibliographicalImporter::CSV::Record_Generic
create BibliographicalImporter::CSV::Record_Refworks
create BibliographicalImporter::Ris::Record
create BibliographicalImporter::JSON::Record
create BibliographicalImporter::BibTex::Record
create ReportBuilder::ProcessReport::Excel
create ReportBuilder::FullTextReport::Excel
create BibliographicalImporter::PmcEfetchXml::Record
create BibliographicalImporter::PubmedSummary::Record
create BibliographicalImporter::JSONApiCrossref::Record
create_authorizations Buhos::SchemaCreation
create_bootstrap_data Buhos::SchemaCreation
create_db_from_scratch Buhos::SchemaCreation
#create_hash_update BibliographicFileProcessor
create_new_user User
#create_record_search_by_ids PdfFileProcessor
create_roles Buhos::SchemaCreation
create_schema Buhos::SchemaCreation
#create_svg ReportBuilder::PrismaReport
create_users Buhos::SchemaCreation
#create_wb ReportBuilder::ProcessReport::Excel
#create_wb ReportBuilder::FullTextReport::Excel
#criteria Buhos::AnalysisIncExcCriteria
#criteria Buhos::AnalysisQualityCriteria
#criteria_hash SystematicReview
#crossref_integrator CanonicalDocument
#crossref_query Record
#crossref_query Reference
#csv BibliographicalImporter::CSV::Reader
#current Buhos::DBAdapter
#current_first_record Sinatra::Pagers::Pager
#current_last_record Sinatra::Pagers::Pager
#current_stages SystematicReview
#deallocate_tag T_Class
#decision_by_cd AnalysisUserDecision
#decision_cd_id AnalysisUserDecision
#decision_class_bootstrap HTMLHelpers
#decisions AnalysisUserDecision
#decisions_by_cd Analysis_SR_Stage
#decisions_by_cd AnalysisSrStageMixin
#decisions_pattern AnalysisSrStageMixin
#decisions_without_cd_support Buhos::InconsistenciesAnalysis
#delete Group
#delete Search
#delete Role
#delete SystematicReview
#delete_if_unused Tag
delete_views Buhos::SchemaCreation
#description FormBuilder::Field
determine_type BibliographicalImporter::BibTex::Record
#dir_base Buhos::Helpers
#dir_files Buhos::Helpers
#dir_files PdfFileProcessor
#doi PdfFileProcessor
#doi BibliographicalImporter::CommonRecordAttributes
#doi BibliographicalImporter::JSON::Reference
#doi BibliographicalImporter::JSONApiCrossref::Reference
#doi_as_pmid PMC::DoiToPmidProcessor
#doi_bad PMC::DoiToPmidProcessor
#doi_list PMC::DoiToPmidProcessor
#doi_s BibliographicalImporter::JSON::Reference
#doi_s BibliographicalImporter::JSONApiCrossref::Reference
#doi_t ReferenceMethods
#doi_without_http DOIHelpers
#ds_to_json Buhos::Helpers
#e_html ReferenceMethods
#each PMC::EfetchXMLSummaries
#each BibliographicalImporter::CSV::Reader
#each BibliographicalImporter::Ris::Reader
#each BibliographicalImporter::JSON::Reader
#each BibliographicalImporter::BibTex::Reader
#each TagBuilder::ContainerTagBwCd
#each TagBuilder::ContainerTagInCd
#each BibliographicalImporter::PmcEfetchXml::Reader
#each BibliographicalImporter::PubmedSummary::Reader
#each BibliographicalImporter::JSONApiCrossref::Reader
#each_field FormBuilder
#ebscohost_id BibliographicalImporter::CommonRecordAttributes
#empty_decisions_hash Analysis_SR_Stage
#end_body Sinatra::Tabs::TabsContainer
#end_tag AbstractPresentation
#error Result
#error ScopusRemote
#error SemanticScholar::Remote
#error Buhos::CriteriaProcessor
#error Buhos::SimilarAnalysisSr
#error BibliographicFileProcessor
#events Result
#extra Sinatra::Pagers::Pager
#fields ReportBuilder::FulltextReport
#fields SystematicReview
#file_id FileProcessor
#filename FileProcessor
#filepath FileProcessor
#files Buhos::Reflection::Authorizations
#files_by_cd AnalysisSystematicReview
files_wo_cd FileSr
#filetype FileProcessor
#find_doi DOIHelpers
fix_string BibliographicalImporter::Ris::Reader
fix_string BibliographicalImporter::BibTex::Reader
generate BibliographicalImporter::AbstractWriter
generate BibliographicalImporter::Ris::Writer
generate BibliographicalImporter::BibTex::Writer
#generate_excel Buhos::ExcelBuilder
#generate_graphml Buhos::GraphML_Builder
generate_query_from_text CrossrefQuery
get Buhos::Configuration
get Pmc_Summary
get Scopus_Abstract
get Semantic_Scholar_Paper
get_abstract_cd PubmedRemote
get_abstract_cd Scopus_Abstract
get_abstract_cd Semantic_Scholar_Paper
#get_asrs AnalysisSrStageMixin
#get_auth_from_haml Buhos::Reflection::Authorizations
#get_auth_from_ruby_files Buhos::Reflection::Authorizations
get_authorizations Buhos::Reflection
get_by_text Reference
get_by_text_and_doi Reference
#get_canonical_document PdfFileProcessor
get_criterion Criterion
get_criterion QualityCriterion
#get_doi PdfProcessor
#get_file_canonical_document Sinatra::SinatraFileHandler::Helpers
get_id_user_by_login Buhos::SchemaCreation
#get_inline_codes ReportBuilder::FulltextReport
#get_integrator BibliographicFileProcessor
#get_lang Sinatra::I18n::Helpers
#get_modal_files Sinatra::SinatraFileHandler::Helpers
get_name_decision Decision
get_name_present CdCriterion
get_name_resolution Resolution
get_name_type SrCriterion
#get_only_text Sinatra::SinatraFileHandler::Helpers
#get_pager Sinatra::Pagers::Helpers
#get_record_by_uid PdfFileProcessor
get_report ReportBuilder
get_reviews_by_user SystematicReview
get_routes Buhos::Reflection
get_source_name Search
get_source_name_short Search
get_stage_name Buhos::Stages
#get_stage_name Buhos::StagesMixin
#get_stages_ids Buhos::StagesMixin
#get_stages_names Buhos::StagesMixin
#get_stages_names_t Buhos::StagesMixin
#get_stemmer_text CategorizerSr
#get_string BibliographicalImporter::Ris::Record
#get_tabs Sinatra::Tabs::Helpers
get_tag Tag
#get_tags_decision_stats Buhos::AnalysisTags
#get_text_at BibliographicalImporter::PmcEfetchXml::Record
#get_title_head Buhos::Helpers
get_type_name Search
#get_xeditable_checkbox Sinatra::Xeditable_Checkbox::Helpers
#get_xeditable_select Sinatra::Xeditable_Select::Helpers
#get_xeditable_select_bool Sinatra::Xeditable_Select::Helpers
#group_name SystematicReview
#group_users SystematicReview
#groups User
#halt_unless_auth Sinatra::SessionAuth::Helpers
#halt_unless_auth_any Sinatra::SessionAuth::Helpers
#have_allocations? AnalysisUserDecision
#header Sinatra::Tabs::TabsContainer
#html FormBuilder::Field
#html Sinatra::Xeditable_Select::Select
#html Sinatra::Xeditable_Checkbox::Checkbox
#html_class Sinatra::XeditableAbstract
#html_field ReportBuilder::FulltextReport
#html_field_multiple ReportBuilder::FulltextReport
#html_field_select ReportBuilder::FulltextReport
#html_modal FileHandler::ModalFiles
#html_with_keywords AbstractPresentation
#id TagMixin
id_a_name_h BibliographicDatabase
#include_authorization? Role
#incoming_citations Analysis_SR_Stage
#incoming_citations AnalysisSrStageMixin
#info Result
#initialize Result
#initialize PMC::EfetchXMLSummaries
#initialize PMC::Efetch
#initialize RisReader
#initialize FileHandler::ModalFiles
#initialize FormBuilder
#initialize FormBuilder::Field
#initialize Sinatra::Tabs::TabsContainer
#initialize PdfProcessor::Abstract
#initialize PdfProcessor
#initialize ScopusRemote
#initialize CategorizerSr
#initialize FileProcessor
#initialize OutgoingEmail
#initialize Sinatra::Pagers::PagerCdQueryAdapter
#initialize Sinatra::Pagers::PagerAdsQueryAdapter
#initialize Sinatra::Pagers::Pager
#initialize Buhos::DBAdapter
#initialize Buhos::Reflection::Authorizations
#initialize SearchValidator
#initialize SemanticScholar::Remote
#initialize Analysis_SR_Stage
#initialize PdfFileProcessor
#initialize Buhos::AnalysisTags
#initialize Buhos::ExcelBuilder
#initialize Buhos::SearchParser
#initialize ReferenceProcessor
#initialize UserDashboardInfo
#initialize AbstractPresentation
#initialize Buhos::GraphML_Builder
#initialize SearchValidatorUser
#initialize TagBuilder::TagBwCd
#initialize TagBuilder::TagInCd
#initialize AnalysisUserDecision
#initialize Buhos::AnalysisSearches
#initialize SearchValidatorReview
#initialize Buhos::CriteriaProcessor
#initialize Buhos::DuplicateAnalysis
#initialize Sinatra::Xeditable_Select::Select
#initialize Buhos::SimilarAnalysisSr
#initialize PMC::DoiToPmidProcessor
#initialize RecordCrossrefProcessor
#initialize AnalysisSystematicReview::ReferencesBetweenCanonicals
#initialize AnalysisSystematicReview
#initialize Sinatra::XeditableAbstract
#initialize Buhos::AnalysisCdDecisions
#initialize BibliographicFileProcessor
#initialize BibliographicalImporter::CSV::Record_Generic
#initialize BibliographicalImporter::CSV::Record_Refworks
#initialize BibliographicalImporter::CSV::Reader
#initialize BibliographicalImporter::Ris::Record
#initialize BibliographicalImporter::Ris::Reader
#initialize ReportBuilder::PrismaReport
#initialize BibliographicalImporter::JSON::Reference
#initialize BibliographicalImporter::JSON::Record
#initialize BibliographicalImporter::JSON::Reader
#initialize ReportBuilder::ProcessReport
#initialize Buhos::InconsistenciesAnalysis
#initialize ReportBuilder::FulltextReport
#initialize BibliographicalImporter::BibTex::Record
#initialize BibliographicalImporter::BibTex::Reader
#initialize Buhos::AnalysisIncExcCriteria
#initialize Buhos::AnalysisQualityCriteria
#initialize TagBuilder::ContainerTagBwCd
#initialize TagBuilder::ContainerTagInCd
#initialize ReportBuilder::ProcessReport::Excel
#initialize ReportBuilder::FullTextReport::Excel
#initialize BibliographicalImporter::PmcEfetchXml::Record
#initialize BibliographicalImporter::PmcEfetchXml::Reader
#initialize BibliographicalImporter::PubmedSummary::Record
#initialize BibliographicalImporter::PubmedSummary::Reader
#initialize BibliographicalImporter::JSONApiCrossref::Reference
#initialize BibliographicalImporter::JSONApiCrossref::Record
#initialize BibliographicalImporter::JSONApiCrossref::Reader
#initialize_common TagMixin
insert_basic_scales Buhos::SchemaCreation
insert_bib_db_data Buhos::SchemaCreation
insert_group_user_if_not_exists Buhos::SchemaCreation
insert_taxonomies_data Buhos::SchemaCreation
#invalid_records SearchValidator
#invalid_records_id SearchValidator
#invalid_records_n SearchValidator
#is_administrator_sr? UserDashboardInfo
#is_member? UserDashboardInfo
#is_session_user Sinatra::SessionAuth::Helpers
#is_type? Search
is_valid_type? SrField
#issue BibliographicalImporter::CommonRecordAttributes
#items_hash Scale
#javascript FormBuilder
#javascript Sinatra::XeditableAbstract
#javascript_header FileHandler::ModalFiles
#jb BibliographicalImporter::JSON::Reader
#jb BibliographicalImporter::JSONApiCrossref::Reader
#journal BibliographicalImporter::CommonRecordAttributes
#journal_abbr BibliographicalImporter::CommonRecordAttributes
#json_by_id SemanticScholar::Remote
#jv BibliographicalImporter::JSON::Record
#jv BibliographicalImporter::JSONApiCrossref::Record
#keywords PdfProcessor
#keywords AbstractPresentation
#keywords BibliographicalImporter::CommonRecordAttributes
#keywords_as_array SystematicReview
#keywords_parse= BibliographicalImporter::CSV::Record_Generic
#keywords_plus BibliographicalImporter::CommonRecordAttributes
#language BibliographicalImporter::CommonRecordAttributes
#lf_to_br HTMLHelpers
#log Buhos::Helpers
#log_error BibliographicFileProcessor
#log_success BibliographicFileProcessor
#logger Buhos::DBAdapter
#logout Sinatra::SessionAuth::Helpers
#map_custom_field ReportBuilder::FullTextReport::Excel
#matrix Buhos::SimilarAnalysisSr
#max_page Sinatra::Pagers::Pager
#mean_similarity Buhos::SimilarAnalysisSr
merge CanonicalDocument
#message Result
#method Sinatra::XeditableAbstract
#method_missing Buhos::DBAdapter
method_missing Buhos::DBAdapter
#more_cited AnalysisSystematicReview
#mostrar TagMixin
#multiple_info ReportBuilder::FulltextReport
#n_records Sinatra::Pagers::Pager
#name Search
name_a_id_h BibliographicDatabase
#negativos TagMixin
#nil_value Sinatra::Xeditable_Select::Select
open BibliographicalImporter::AbstractReader
open BibliographicalImporter::CSV::Reader
open BibliographicalImporter::Ris::Reader
open BibliographicalImporter::JSON::Reader
open BibliographicalImporter::BibTex::Reader
open BibliographicalImporter::PmcEfetchXml::Reader
open BibliographicalImporter::PubmedSummary::Reader
open BibliographicalImporter::JSONApiCrossref::Reader
#options_as_hash SrField
#order Sinatra::Pagers::Pager
#ordered_tags TagBuilder::ContainerTagMixin
#outcoming_citations Analysis_SR_Stage
#outgoing_citations AnalysisSrStageMixin
#output ReportBuilder::ReportAbstract
#output ReportBuilder::ProcessReport
#output ReportBuilder::FulltextReport
#output_excel_download ReportBuilder::ProcessReport
#output_excel_download ReportBuilder::FulltextReport
#output_svg ReportBuilder::PrismaReport
#output_svg_download ReportBuilder::PrismaReport
#page PdfProcessor
#page Sinatra::Pagers::Pager
#pages BibliographicalImporter::CommonRecordAttributes
#pages BibliographicalImporter::JSON::Reference
#pages BibliographicalImporter::JSONApiCrossref::Reference
#parse PdfProcessor::Abstract
#parse Buhos::SearchParser
parse BibliographicalImporter::AbstractReader
parse BibliographicalImporter::CSV::Reader
parse BibliographicalImporter::Ris::Reader
parse BibliographicalImporter::JSON::Reader
parse BibliographicalImporter::BibTex::Reader
parse BibliographicalImporter::PmcEfetchXml::Reader
parse BibliographicalImporter::PubmedSummary::Reader
parse BibliographicalImporter::JSONApiCrossref::Reader
#parse_common BibliographicalImporter::CSV::Record_Generic
#parse_common BibliographicalImporter::CSV::Record_Refworks
#parse_common BibliographicalImporter::Ris::Record
#parse_common BibliographicalImporter::JSON::Record
#parse_common BibliographicalImporter::BibTex::Record
#parse_common BibliographicalImporter::BibTex::Record_Wos
#parse_common BibliographicalImporter::PmcEfetchXml::Record
#parse_common BibliographicalImporter::PubmedSummary::Record
#parse_common BibliographicalImporter::JSONApiCrossref::Record
parse_json BibliographicalImporter::JSONApiCrossref::Reader
#parse_records BibliographicalImporter::CSV::Reader
#parse_records BibliographicalImporter::Ris::Reader
#parse_records BibliographicalImporter::JSON::Reader
#parse_records BibliographicalImporter::BibTex::Reader
#parse_records BibliographicalImporter::PmcEfetchXml::Reader
#parse_records BibliographicalImporter::PubmedSummary::Reader
#parse_records BibliographicalImporter::JSONApiCrossref::Reader
#parse_specific BibliographicalImporter::Ris::Record
#parse_specific BibliographicalImporter::BibTex::Record
#parse_specific BibliographicalImporter::BibTex::Record_Scopus
#parse_specific BibliographicalImporter::BibTex::Record_Wos
#parse_specific BibliographicalImporter::BibTex::Record_Scielo
#parse_specific BibliographicalImporter::BibTex::Record_Ebscohost
#parse_specific BibliographicalImporter::BibTex::Record_Generic
#partial Sinatra::Partials
#pattern_from_s AnalysisSystematicReview
#pattern_id AnalysisSystematicReview
#pattern_name AnalysisSystematicReview
#pattern_order AnalysisSystematicReview
#percent_from_proportion Buhos::Helpers
#permission_a_editable HTMLHelpers
#permits Buhos::Reflection::Authorizations
#pmid_list PMC::Efetch
#pmid_xml PMC::Efetch
#positivos TagMixin
#predeterminado TagMixin
#prepare_stream Buhos::ExcelBuilder
#prepare_stream Buhos::GraphML_Builder
#print_messages Sinatra::Messages::Helpers
#procesar_cd_ids AnalysisUserDecision
#process PMC::Efetch
#process RisReader
#process Sinatra::Pagers::PagerCdQueryAdapter
#process Sinatra::Pagers::PagerAdsQueryAdapter
#process PdfFileProcessor
#process Buhos::SimilarAnalysisSr
#process PMC::DoiToPmidProcessor
#process_abstract_text Buhos::Helpers
#process_array Buhos::CriteriaProcessor
#process_basic_indicators AnalysisUserDecision
#process_canonical_documents BibliographicFileProcessor
#process_doi ReferenceProcessor
process_doi CrossrefDoi
#process_doi_slice PMC::DoiToPmidProcessor
#process_file BibliographicFileProcessor
#process_information ReportBuilder::PrismaReport
#process_records RecordCrossrefProcessor
#process_reference BibliographicFileProcessor
process_single_pmid PubmedRemote
#process_slice PMC::Efetch
#process_values Sinatra::XeditableAbstract
#proportion_by_cd Buhos::AnalysisIncExcCriteria
#proportion_by_cd Buhos::AnalysisQualityCriteria
#protect_encoding Buhos::Helpers
#ps_value BibliographicalImporter::PubmedSummary::Record
#pubmed_available? Buhos::Helpers
#pubmed_id BibliographicalImporter::CommonRecordAttributes
#pubmed_integrator CanonicalDocument
#push PMC::EfetchXMLSummaries
#put_editable HTMLHelpers
#query Sinatra::Pagers::Pager
#quitar_llaves BibliographicalImporter::BibTex::Record_Wos
#raw_key_value ReferenceMethods
#reader PdfProcessor
reassign_assignations AllocationCd
#rec AnalysisSystematicReview
#record BibliographicalImporter::Ris::Record
#record_by_id SemanticScholar::Remote
#records RisReader
#records Buhos::AnalysisSearches
#records BibliographicalImporter::CSV::Reader
#records BibliographicalImporter::Ris::Reader
#records BibliographicalImporter::JSON::Reader
#records BibliographicalImporter::BibTex::Reader
#records BibliographicalImporter::PmcEfetchXml::Reader
#records BibliographicalImporter::PubmedSummary::Reader
#records BibliographicalImporter::JSONApiCrossref::Reader
#records_by_cd Buhos::AnalysisSearches
#records_by_cd_summary Buhos::AnalysisSearches
#records_in_sr Reference
#records_n Search
#ref_apa_6 ReferenceMethods
#ref_apa_6_base ReferenceMethods
#ref_apa_6_brief ReferenceMethods
#ref_apa_6_brief_html ReferenceMethods
#ref_count_incoming AnalysisSystematicReview
#ref_count_outgoing AnalysisSystematicReview
#reference ReferenceProcessor
reference_between_canonicals AnalysisSystematicReview
reference_integrator_json CrossrefDoi
reference_integrator_xml PubmedRemote
#references BibliographicalImporter::JSON::Record
#references Record
#references Search
#references_automatic_crossref Record
#references_bw_canonical SystematicReviewViewsMixin
#references_bw_canonical_tn SystematicReviewViewsMixin
#references_crossref BibliographicalImporter::CommonRecordAttributes
#references_crossref BibliographicalImporter::JSON::Record
#references_crossref BibliographicalImporter::JSONApiCrossref::Record
#references_id Record
#references_n Search
#references_performed CanonicalDocument
#references_scopus BibliographicalImporter::CommonRecordAttributes
#references_with_canonical_n Search
#references_wo_canonical_n Search
#references_wo_canonical_w_doi_n Search
#references_wos BibliographicalImporter::CommonRecordAttributes
#refworks_id BibliographicalImporter::CommonRecordAttributes
registered Sinatra::CustomErrors
registered Sinatra::SinatraFileHandler
registered Sinatra::I18n
registered Sinatra::Tabs
registered Sinatra::Pagers
registered Sinatra::Messages
registered Sinatra::SessionAuth
registered Sinatra::Xeditable_Select
registered Sinatra::Xeditable_Checkbox
reject_tag TagBwCd
reject_tag TagInCd
reject_tag_batch TagInCd
remove_canonicals Reference
#replies Message
#replies MessageSr
#report ReportBuilder::ProcessReport::Excel
#report ReportBuilder::FullTextReport::Excel
#resolution_by_cd AnalysisSrStageMixin
#resolution_commentary_by_cd AnalysisSrStageMixin
#resolution_pattern AnalysisSrStageMixin
#resolutions_by_cd Analysis_SR_Stage
#resolutions_by_cd Buhos::AnalysisSearches
#resolutions_by_cd_summary Buhos::AnalysisSearches
#resolutions_commentary_by_cd Analysis_SR_Stage
#resolutions_f_pattern_decision AnalysisSrStageMixin
#resolutions_full_text SystematicReviewViewsMixin
#resolutions_full_text_tn SystematicReviewViewsMixin
#resolutions_references SystematicReviewViewsMixin
#resolutions_references_tn SystematicReviewViewsMixin
#resolutions_title_abstract SystematicReviewViewsMixin
#resolutions_title_abstract_tn SystematicReviewViewsMixin
#resolutions_without_cd_support Buhos::InconsistenciesAnalysis
#resolve_inconsistencies_decisions Buhos::InconsistenciesAnalysis
#resolve_inconsistencies_resolutions Buhos::InconsistenciesAnalysis
#result ReferenceProcessor
#result RecordCrossrefProcessor
#result BibliographicFileProcessor
#resultado_usuario TagMixin
#results PdfFileProcessor
#retrieve_json SemanticScholar::Remote
retrieve_pmid PubmedRemote
#review TagBuilder::ContainerTagMixin
#review_analyzed_by Sinatra::SessionAuth::Helpers
#review_belongs_to Sinatra::SessionAuth::Helpers
#row BibliographicalImporter::CSV::Record_Generic
#row BibliographicalImporter::CSV::Record_Refworks
#rs AnalysisSystematicReview
#scale_items Buhos::AnalysisQualityCriteria
#scielo_id BibliographicalImporter::CommonRecordAttributes
#scopus ScopusRemote
#scopus_available? Buhos::Helpers
#scopus_id BibliographicalImporter::CommonRecordAttributes
#search BibliographicFileProcessor
#search_id PdfFileProcessor
#search_similar_references CanonicalDocument
#search_similars Reference
#searches SearchValidator
#searches Buhos::AnalysisSearches
#searches_data SearchValidator
#searches_id Buhos::AnalysisSearches
#searches_n SearchValidator
#searches_not_ready UserDashboardInfo
#select_html FormBuilder::Field
#select_info ReportBuilder::FulltextReport
#select_year HTMLHelpers
#send_email OutgoingEmail
set Buhos::Configuration
#show_user Sinatra::SessionAuth::Helpers
similar_to_cd_in_sr Buhos::SimilarAnalysisSr
#similarity_all_to_one Buhos::SimilarAnalysisSr
#similarity_two Buhos::SimilarAnalysisSr
#simulate_file_uploaded PdfFileProcessor
#sin_votos? TagMixin
#source_name Search
#source_name_short Search
#sources_accepted_resolutions_by_stage AnalysisSystematicReview
#sql_in Buhos::AnalysisSearches
#sr ReportBuilder::ReportAbstract
#sr Analysis_SR_Stage
#sr Buhos::ExcelBuilder
#sr SearchValidatorUser
#sr SearchValidatorReview
#sr Buhos::AnalysisIncExcCriteria
#sr Buhos::AnalysisQualityCriteria
#sr ReportBuilder::ProcessReport::Excel
#sr ReportBuilder::FullTextReport::Excel
sr_criterion_add SrCriterion
sr_criterion_remove SrCriterion
#sr_tags_prev Buhos::ControllerReview
#ss SemanticScholar::Remote
#stage Analysis_SR_Stage
#stage Buhos::ExcelBuilder
#stage_complete? Analysis_SR_Stage
#stage_complete? AnalysisSrStageMixin
#stage_name SystematicReview
#start_body Sinatra::Tabs::TabsContainer
#statistics_tags SystematicReview
#status_in_stages_cd AnalysisSystematicReview
#status_in_stages_cd_id AnalysisSystematicReview
#stream Buhos::ExcelBuilder
#stream ReportBuilder::ProcessReport::Excel
#stream ReportBuilder::FullTextReport::Excel
#strip_lines BibliographicalImporter::CSV::Record_Generic
#strip_lines BibliographicalImporter::CSV::Record_Refworks
#strip_lines BibliographicalImporter::JSON::Record
#strip_lines BibliographicalImporter::BibTex::Record
#strip_lines BibliographicalImporter::PmcEfetchXml::Record
#strip_lines BibliographicalImporter::PubmedSummary::Record
#strip_lines BibliographicalImporter::JSONApiCrossref::Record
#success Result
#success? Result
#summaries PMC::EfetchXMLSummaries
#summary_sources_databases Buhos::AnalysisSearches
#summary_sources_databases AnalysisSystematicReview
#systematic_review PdfFileProcessor
#systematic_review AnalysisUserDecision
#systematic_review Buhos::InconsistenciesAnalysis
#systematic_review_id Buhos::AnalysisTags
#systematic_review_included CanonicalDocument
#systematic_reviews User
#systematic_reviews Group
#systematic_reviews_id User
#t Sinatra::I18n::Helpers
#t_canonical_document_title Sinatra::I18n::Helpers
#t_desc_value Sinatra::I18n::Helpers
#t_generic_title Sinatra::I18n::Helpers
#t_search_title Sinatra::I18n::Helpers
#t_systematic_review_title Sinatra::I18n::Helpers
#t_taxonomy_category Sinatra::I18n::Helpers
#t_taxonomy_group Sinatra::I18n::Helpers
#t_yes_no_nil Sinatra::I18n::Helpers
#tab Sinatra::Tabs::TabsContainer
tag_bw_cd TagBuilder
#tag_cd_rs TagBuilder::ContainerTagInCd
#tag_cd_rs_ref TagBuilder::ContainerTagBwCd
#tag_id Buhos::AnalysisTags
tag_in_cd TagBuilder
#tag_keyword AbstractPresentation
#tags T_Class
#tags_by_canonical_document Buhos::AnalysisTags
#tags_in_cds Buhos::AnalysisTags
tags_rs TagInCd
tags_rs_cd TagBwCd
tags_rs_cd TagInCd
#taxonomy_categories_hash SystematicReview
#taxonomy_categories_id SystematicReview
#text AbstractPresentation
#text TagMixin
#text_decision_cd Buhos::AnalysisCdDecisions
#text_html FormBuilder::Field
#textarea_html FormBuilder::Field
#time_sql Buhos::Helpers
#title Buhos::Helpers
#title PdfProcessor
#title PdfFileProcessor
#title BibliographicalImporter::CommonRecordAttributes
#title Sinatra::XeditableAbstract
#to_array SearchGrammar::FilterGroup
#to_array SearchGrammar::Boolean
#to_array SearchGrammar::Filter
#to_array SearchGrammar::Identifier
#to_array SearchGrammar::String
#to_array SearchGrammar::Required
#to_array SearchGrammar::Body
#to_array SearchGrammar::Expression
#to_array SearchGrammar::Space
to_hash Scale
#to_html Buhos::AnalysisCdDecisions
#to_s BibliographicalImporter::JSON::Reference
#to_s BibliographicalImporter::JSONApiCrossref::Reference
#to_sql Buhos::SearchParser
#to_sql_elements Buhos::SearchParser
#to_text Buhos::AnalysisCdDecisions
#to_tf_idf_similarity Buhos::SimilarAnalysisSr
#tokenize Buhos::TextualAnalysisMixin
#tooltip HTMLHelpers
#total_decisions AnalysisUserDecision
#tree Buhos::SearchParser
#tree_processed Buhos::SearchParser
#truncate Buhos::Helpers
#type BibliographicalImporter::CommonRecordAttributes
#type BibliographicalImporter::BibTex::Record_Scopus
#type BibliographicalImporter::BibTex::Record_Wos
#type BibliographicalImporter::BibTex::Record_Scielo
#type BibliographicalImporter::BibTex::Record_Ebscohost
#type BibliographicalImporter::BibTex::Record_Generic
#type_name Search
types_a_sequel SrField
types_hash SrField
#uid PdfFileProcessor
#uid BibliographicalImporter::CommonRecordAttributes
#unread_personal_messages UserDashboardInfo
#unread_sr_messages UserDashboardInfo
update_assignation AllocationCd
#update_criteria Buhos::CriteriaProcessor
update_decision_tag TagBwCd
#update_info_using_crossref Record
#update_info_using_record CanonicalDocument
#update_model_association Buhos::DBAdapter
#update_records Search
#update_references Record
#update_search SearchValidator
update_table SrField
#uri_encode Sinatra::Pagers::Pager
#url HTMLHelpers
#url BibliographicalImporter::CommonRecordAttributes
#url_data Sinatra::XeditableAbstract
#url_doi DOIHelpers
#url_t TagBuilder::TagBwCd
#url_t TagBuilder::TagInCd
#url_update FormBuilder::Field
#use_db Buhos::DBAdapter
#use_stemmer Buhos::SimilarAnalysisSr
#user UserDashboardInfo
#user SearchValidatorUser
#user_decisions AnalysisSrStageMixin
#user_id Buhos::AnalysisTags
#user_name Search
#user_name Message
#user_name MessageSr
#valid SearchValidator
valid_presence? CdCriterion
#valid_records SearchValidator
#valid_records_id SearchValidator
#valid_records_n SearchValidator
#validate SearchValidator
#values Sinatra::XeditableAbstract
#volume BibliographicalImporter::CommonRecordAttributes
#warning Result
#where_sql Buhos::AnalysisTags
#with_more_references AnalysisSystematicReview
#wos_id BibliographicalImporter::CommonRecordAttributes
#xeditable_type Sinatra::Xeditable_Select::Select
#xeditable_type Sinatra::XeditableAbstract
#xeditable_type Sinatra::Xeditable_Checkbox::Checkbox
#xml BibliographicalImporter::PmcEfetchXml::Record
#xml_a BibliographicalImporter::PmcEfetchXml::Reader
#xml_abstract_by_id ScopusRemote
#year BibliographicalImporter::CommonRecordAttributes